Dynamic spatiotemporal determinants modulate GPCR:G protein coupling selectivity and promiscuity

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

Dokumenter

  • Fulltext

    Forlagets udgivne version, 2,55 MB, PDF-dokument

  • Manbir Sandhu
  • Aaron Cho
  • Ning Ma
  • Elizaveta Mukhaleva
  • Yoon Namkung
  • Sangbae Lee
  • Soumadwip Ghosh
  • John H. Lee
  • Gloriam, David E.
  • Stéphane A. Laporte
  • M. Madan Babu
  • Nagarajan Vaidehi

Recent studies have shown that G protein coupled receptors (GPCRs) show selective and promiscuous coupling to different Gα protein subfamilies and yet the mechanisms of the range of coupling preferences remain unclear. Here, we use Molecular Dynamics (MD) simulations on ten GPCR:G protein complexes and show that the location (spatial) and duration (temporal) of intermolecular contacts at the GPCR:Gα protein interface play a critical role in how GPCRs selectively interact with G proteins. We identify that some GPCR:G protein interface contacts are common across Gα subfamilies and others specific to Gα subfamilies. Using large scale data analysis techniques on the MD simulation snapshots we derive a spatio-temporal code for contacts that confer G protein selective coupling and validated these contacts using G protein activation BRET assays. Our results demonstrate that promiscuous GPCRs show persistent sampling of the common contacts more than G protein specific contacts. These findings suggest that GPCRs maintain contact with G proteins through a common central interface, while the selectivity comes from G protein specific contacts at the periphery of the interface.

OriginalsprogEngelsk
Artikelnummer7428
TidsskriftNature Communications
Vol/bind13
Udgave nummer1
Antal sider14
ISSN2041-1723
DOI
StatusUdgivet - 2022

Bibliografisk note

Publisher Copyright:
© 2022, The Author(s).

ID: 329206676